(HS 1) Toward Seamless Environmental Modeling: Integration of HydroShare with Server-side Methods for Exposing Large Datasets to Models
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This resource does not have an owner who is an active HydroShare user. Contact CUAHSI (help@cuahsi.org) for information on this resource. |
Type: | Collection | |
Storage: | The size of this collection is 2.0 KB | |
Created: | May 14, 2021 at 2:59 a.m. | |
Last updated: | Oct 15, 2024 at 6:58 p.m. (Metadata update) | |
Published date: | Oct 15, 2024 at 6:58 p.m. | |
DOI: | 10.4211/hs.afcc703d884e4f73b598c9e4b8f8a15e | |
Citation: | See how to cite this resource |
Sharing Status: | Published |
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Views: | 1805 |
Downloads: | 30 |
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Abstract
This HydroShare resource was created to support the study presented in Choi et al. (2024), titled "Toward Reproducible and Interoperable Environmental Modeling: Integration of HydroShare with Server-side Methods for Exposing Large-Extent Spatial Datasets to Models." Ensuring the reproducibility of scientific studies is crucial for advancing research, with effective data management serving as a cornerstone for achieving this goal. In hydrologic and environmental modeling, spatial data is used as model input, and sharing this spatial data is a main step in the data management process. However, by focusing only on sharing data at the file level through small files rather than providing the ability to Find, Access, Interoperate with, and directly Reuse subsets of larger datasets, online data repositories have missed an opportunity to foster more reproducible science. This has led to challenges when accommodating large files that benefit from consistent data quality and seamless geographic extent.
To utilize the benefits of large datasets, the objective of the Choi et al. (2024) study was to create and test an approach for exposing large extent spatial (LES) datasets to support catchment-scale hydrologic modeling needs. GeoServer and THREDDS Data Server connected to HydroShare were used to provide seamless access to LES datasets. The approach was demonstrated using the Regional Hydro-Ecologic Simulation System (RHESSys) for three different-sized watersheds in the US. Data consistency was assessed across three different data acquisition approaches: the 'conventional' approach, which involved sharing data at the file level through small files, as well as GeoServer and THREDDS Data Server. This assessment was conducted using RHESSys to evaluate differences in model streamflow output. This approach provided an opportunity to serve datasets needed to create catchment models in a consistent way that could be accessed and processed to serve individual modeling needs. For full details on the methods and approach, please refer to Choi et al. (2024). This HydroShare resource is essential for accessing the data and workflows that were integral to the study.
This collection resource (HS 1) comprises 7 individual HydroShare resources (HS 2-8), each containing different datasets or workflows. These 7 HydroShare resources consist of the following: three resources for three state-scale LES datasets (HS 2-4), one resource with Jupyter notebooks for three different approaches and three different watersheds (HS 5), one resource for RHESSys model instances (i.e., input) of the conventional approach and observation data for all data access approaches in three different watersheds (HS 6), one resource with Jupyter notebooks for automated workflows to create LES datasets (HS 7), and finally one resource with Jupyter notebooks for the evaluation of data consistency (HS 8). More information on each resource is provided within it.
Subject Keywords
Coverage
Spatial
Collection Contents
Add | Title | Type | Owners | Sharing Status | Remove |
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(HS 4) Large Extent Spatial Datasets in Maryland | Resource | Iman Maghami | Published & Shareable | ||
(HS 5) Large Extent Spatial Datasets in Virginia | Resource | Zhiyu/Drew Li | Published & Shareable | ||
(HS 3) Large Extent Spatial Datasets in North Carolina | Resource | Zhiyu/Drew Li | Published & Shareable | ||
(HS 2) Automate Workflows using Jupyter notebook to create Large Extent Spatial Datasets | Resource | Jonathan Goodall | Published & Shareable | ||
(HS 8) Comparative Evaluation of Data Consistency: Conventional vs. Server-side Methods for Exposing Large Extent Spatial Datasets to Models | Resource | Zhiyu/Drew Li | Published & Shareable | ||
(HS 7) Jupyter Notebook for RHESSys Modeling Workflow: Toward Seamless Environmental Modeling | Resource | Iman Maghami | Published & Shareable | ||
(HS 6) RHESSys Spatial Input Data for RHESSys Modeling Workflow: Toward Seamless Environmental Modeling | Resource | Iman Maghami | Published & Shareable |
Related Resources
This resource is referenced by | Choi, Y., Maghami, I., Goodall, J.L., Band, L., Nassar, A., Lin, L., Saby, L., Li, Z., Wang, S., Calloway, C., Yi, H., Seul, M., Ames, D.P., and Tarboton, D.G., 2024. "Toward Reproducible and Interoperable Environmental Modeling: Integration of HydroShare with Server-side Methods for Exposing Large-Extent Spatial Datasets to Models." Environmental Modelling & Software, p.106239. https://doi.org/10.1016/j.envsoft.2024.106239 |
Credits
Funding Agencies
This resource was created using funding from the following sources:
Agency Name | Award Title | Award Number |
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National Science Foundation | Collaborative Research: SI2-SSI: Cyberinfrastructure for Advancing Hydrologic Knowledge through Collaborative Integration of Data Science, Modeling and Analysis | OAC-1664061, OAC-1664018, OAC-1664119 |
National Science Foundation | EarthCube Data Capabilities: Collaborative Research: Integration of Reproducibility into Community CyberInfrastructure | OAC-1849458 |
National Science Foundation | HDR Institute: Geospatial Understanding through an Integrative Discovery Environment | OAC-2118329 |
How to Cite
This resource is shared under the Creative Commons Attribution CC BY.
http://creativecommons.org/licenses/by/4.0/
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